Talk for the Computational and Digital Archaeology seminar series, Cambridge

If you are free today at 4 pm (UK time), join us for the first Computational and Digital Archaeology seminar of the term at the Department of Archaeology, Cambridge.

Palaeoecology made easy: two new tools to make the best use of big data in archaeology

Monday, 9 October, 2023 – 16:00 to 17:00 (UK time)

I will be talking about palaeoecology, #paleoclimate, and big data in archaeology. I will also present two new tools that I co-developed to make palaeoecological analyses easier: pastclim and tidysdm.

Abstract: In recent years, we witnessed the publication of both large datasets of archaeological occurrences and palaeoclimatic data series covering hundreds of thousands of years. This opened the door to new, exciting possibilities in the field of palaeoecology. 

To make the best use of such data, I co-developed two new R packages that facilitate their use and allow simpler pipelines for their analyses.

The first package is pastclim. It is designed to easily access and manipulate climatic data and palaeoclimatic/future climate reconstructions. It contains a set of functions to recover the climate for time periods of interest, crop to specific areas, extract data from locations scattered in space and/or time, retrieve time series from individual sites, and manage the ice or land coverage.

The second package is tidysdm. The rationale behind it is to take advantage of the tidymodels framework in R to perform species distribution modelling (also known as habitat suitability/ecological niche modelling). This is the first software specifically designed to work with occurrences scattered in time, a task that with other tools, is either impossible or requires extensive tweaking. The integration with pastclim allows hassle-free access and handling of climatic data from the past, the present, and the future.

I will also present some applications of such tools, as an example of the new opportunities they could offer to scholars studying the past (e.g. archaeologists, archaeozoologists, palaeoecologists, palaeoanthropologists).

Event location: McDonald Institute for Archaeological Research Seminar Room
Join online: https://zoom.us/j/94826858436?pwd=N1JCeU9Id3dUdkJ4ZDVyUjhtQ0FMQT09

Event series: Computational and Digital Archaeology Laboratory Series

Update: a couple of pictures of my talk

Numerical analyses in archaeology, La Sapienza University of Rome

Yesterday I was invited by Enza Spinapolice (La Sapienza University of Rome) to give a seminar for her Archaeology students (2nd year).

My talk was about “Numerical analysis in archaeology” and was followed by many questions. I hope I have convinced the students that the analysis of numerical data is an approach that can be useful to investigate our past.

Thank you Enza for giving me this opportunity!

Teaching for the “Ancient Biomolecules” module, Cambridge Archaeology

During the last couple of weeks, I have been asked by Matthew Collins (Department of Archaeology, University of Cambridge) to contribute two lectures to the module “Ancient Biomolecules”.

In my lecture “Climate and population genetics” I have discussed how to integrate climate into population genetics and genomics, which are the assumptions to take into account, and how to interpret the resulting information. In “The genetics of horse domestication”, I presented and explained a recent paper (Librado et al 2021, Nature) detailing the domestication and spread of Eurasian horses on the basis of ancient DNA data.

It was a lovely occasion, as my talks were followed by many questions and an interesting discussion. I hope there will be other opportunities to collaborate on these topics.

Talk for the Palaeolithic-Mesolithic seminar series, Cambridge

If you are in Cambridge tomorrow, I will be at the Department of Archaeology to give a talk in the Palaeolithic-Mesolithic seminar series.

My presentation will be about “Integrating palaeoclimate into the study of the past“, and I will also be introducing pastclim, our R package to easily access and use palaeoclimatic data. The seminar will not be recorded.

My gratitude goes to Aman Kang and Anna Mika, organisers of the series, who invited me.

Talk for the Uppsala-Hacettepe Palaeogenetics and Population Genetics Seminar Series

Tomorrow I will be giving a talk about “Integrating palaeoclimate into population genomics” for the Uppsala-Hacettepe Palaeogenetics and Population Genetics (UHPalaeopopgen) webinar series.

If you want to follow the webinar, sign up from this link. The talk will not be recorded.

Thanks to the organisers Gülşah Merve Kılınç (Hacettepe University) and Torsten Günther (Uppsala University) for inviting me!